Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm26013-201ENSMUST00000104404 119 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm15529-201ENSMUST00000121833 994 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm24943-201ENSMUST00000158329 433 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm37858-201ENSMUST00000192759 1231 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm6590-201ENSMUST00000203343 687 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm44332-201ENSMUST00000203712 433 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC12.59□□□□□ -0.39
Col9a1Q05722 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm46436-201ENSMUST00000221851 1294 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm45210-201ENSMUST00000206401 1577 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Col9a1Q05722 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a1Q05722 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.59□□□□□ -0.39
Col9a1Q05722 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col9a1Q05722 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col9a1Q05722 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col9a1Q05722 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.39
Col9a1Q05722 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col9a1Q05722 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Mup-ps15-201ENSMUST00000121741 539 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col9a1Q05722 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm28011-201ENSMUST00000184097 175 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm19214-201ENSMUST00000191956 1083 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm18038-201ENSMUST00000197900 485 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm42964-201ENSMUST00000202965 382 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm43894-201ENSMUST00000203274 688 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm44681-201ENSMUST00000208447 842 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC12.58□□□□□ -0.4
Col9a1Q05722 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a1Q05722 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.58□□□□□ -0.4
Col9a1Q05722 AC117949.2-201ENSMUST00000225900 584 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 AC132918.1-201ENSMUST00000227877 925 ntBASIC12.58□□□□□ -0.4
Col9a1Q05722 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms