Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.8□□□□□ -0.52
Emx1Q04742 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.8□□□□□ -0.52
Emx1Q04742 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.8□□□□□ -0.52
Emx1Q04742 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Emx1Q04742 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.8□□□□□ -0.52
Emx1Q04742 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.8□□□□□ -0.52
Emx1Q04742 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.8□□□□□ -0.52
Emx1Q04742 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Emx1Q04742 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.8□□□□□ -0.52
Emx1Q04742 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Emx1Q04742 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Emx1Q04742 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.79□□□□□ -0.52
Emx1Q04742 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Gm15240-201ENSMUST00000118156 720 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Gm12403-201ENSMUST00000121384 959 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.79□□□□□ -0.52
Emx1Q04742 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Emx1Q04742 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.79□□□□□ -0.52
Emx1Q04742 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Emx1Q04742 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.79□□□□□ -0.52
Emx1Q04742 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.79□□□□□ -0.52
Emx1Q04742 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Emx1Q04742 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Emx1Q04742 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Emx1Q04742 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.79□□□□□ -0.52
Emx1Q04742 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Emx1Q04742 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Emx1Q04742 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Emx1Q04742 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.78□□□□□ -0.52
Emx1Q04742 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Emx1Q04742 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.78□□□□□ -0.52
Emx1Q04742 Gm11524-201ENSMUST00000119349 807 ntBASIC11.78□□□□□ -0.52
Emx1Q04742 Gm11814-201ENSMUST00000119515 929 ntBASIC11.78□□□□□ -0.52
Emx1Q04742 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.78□□□□□ -0.52
Emx1Q04742 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Emx1Q04742 Gm15429-201ENSMUST00000151268 798 ntBASIC11.78□□□□□ -0.52
Emx1Q04742 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.78□□□□□ -0.52
Emx1Q04742 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.78□□□□□ -0.52
Emx1Q04742 Gm43094-201ENSMUST00000196549 921 ntBASIC11.78□□□□□ -0.52
Emx1Q04742 Gm19078-201ENSMUST00000206311 727 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms