Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.72□□□□□ -0.37
Pfdn6Q03958 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn6Q03958 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.71□□□□□ -0.37
Pfdn6Q03958 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn6Q03958 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Gm27331-201ENSMUST00000183705 60 ntBASIC12.71□□□□□ -0.37
Pfdn6Q03958 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.71□□□□□ -0.37
Pfdn6Q03958 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn6Q03958 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn6Q03958 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn6Q03958 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.71□□□□□ -0.38
Pfdn6Q03958 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn6Q03958 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn6Q03958 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pfdn6Q03958 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn6Q03958 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn6Q03958 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn6Q03958 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn6Q03958 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.7□□□□□ -0.38
Pfdn6Q03958 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.7□□□□□ -0.38
Pfdn6Q03958 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gm4984-201ENSMUST00000115987 360 ntBASIC12.7□□□□□ -0.38
Pfdn6Q03958 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gm22121-201ENSMUST00000175148 54 ntBASIC12.7□□□□□ -0.38
Pfdn6Q03958 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pfdn6Q03958 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gm5035-201ENSMUST00000215581 927 ntBASIC12.7□□□□□ -0.38
Pfdn6Q03958 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gm19163-201ENSMUST00000223313 780 ntBASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.7□□□□□ -0.38
Pfdn6Q03958 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn6Q03958 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.7□□□□□ -0.38
Pfdn6Q03958 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms