Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smn1P97801 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smn1P97801 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.81□□□□□ -0.68
Smn1P97801 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.81□□□□□ -0.68
Smn1P97801 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Smn1P97801 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Smn1P97801 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Smn1P97801 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.81□□□□□ -0.68
Smn1P97801 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.81□□□□□ -0.68
Smn1P97801 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Smn1P97801 Gm19184-201ENSMUST00000196798 928 ntBASIC10.81□□□□□ -0.68
Smn1P97801 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Smn1P97801 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Smn1P97801 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Syt7-204ENSMUST00000223586 1344 ntBASIC10.81□□□□□ -0.68
Smn1P97801 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.81□□□□□ -0.68
Smn1P97801 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Smn1P97801 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smn1P97801 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Smn1P97801 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Smn1P97801 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.8□□□□□ -0.68
Smn1P97801 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.8□□□□□ -0.68
Smn1P97801 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.8□□□□□ -0.68
Smn1P97801 Gm9630-201ENSMUST00000178304 885 ntBASIC10.8□□□□□ -0.68
Smn1P97801 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.8□□□□□ -0.68
Smn1P97801 Mir6956-201ENSMUST00000183598 62 ntBASIC10.8□□□□□ -0.68
Smn1P97801 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.8□□□□□ -0.68
Smn1P97801 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Gm6983-201ENSMUST00000214912 628 ntBASIC10.8□□□□□ -0.68
Smn1P97801 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.8□□□□□ -0.68
Smn1P97801 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Smn1P97801 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Smn1P97801 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms