Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Gm12957-201ENSMUST00000117835 377 ntBASIC12.87□□□□□ -0.35
Thumpd3P97770 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Thumpd3P97770 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.87□□□□□ -0.35
Thumpd3P97770 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.86□□□□□ -0.35
Thumpd3P97770 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Thumpd3P97770 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.86□□□□□ -0.35
Thumpd3P97770 Gm13226-201ENSMUST00000117838 404 ntBASIC12.86□□□□□ -0.35
Thumpd3P97770 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.86□□□□□ -0.35
Thumpd3P97770 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Gm29649-201ENSMUST00000185649 419 ntBASIC12.86□□□□□ -0.35
Thumpd3P97770 Gm45784-201ENSMUST00000188360 142 ntBASIC12.86□□□□□ -0.35
Thumpd3P97770 Gm7561-201ENSMUST00000211203 886 ntBASIC12.86□□□□□ -0.35
Thumpd3P97770 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.86□□□□□ -0.35
Thumpd3P97770 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Thumpd3P97770 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.86□□□□□ -0.35
Thumpd3P97770 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd3P97770 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.85□□□□□ -0.35
Thumpd3P97770 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.85□□□□□ -0.35
Thumpd3P97770 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Thumpd3P97770 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.85□□□□□ -0.35
Thumpd3P97770 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Thumpd3P97770 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Thumpd3P97770 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Gm13612-201ENSMUST00000119276 390 ntBASIC12.85□□□□□ -0.35
Thumpd3P97770 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.85□□□□□ -0.35
Thumpd3P97770 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.85□□□□□ -0.35
Thumpd3P97770 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.85□□□□□ -0.35
Thumpd3P97770 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.85□□□□□ -0.35
Thumpd3P97770 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.85□□□□□ -0.35
Thumpd3P97770 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd3P97770 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Thumpd3P97770 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms