Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Gm12501-201ENSMUST00000119163 529 ntBASIC15.78■□□□□ 0.12
Smarcc1P97496 Gm11941-201ENSMUST00000119904 610 ntBASIC15.78■□□□□ 0.12
Smarcc1P97496 Rmrp-201ENSMUST00000157463 271 ntBASIC15.78■□□□□ 0.12
Smarcc1P97496 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.78■□□□□ 0.12
Smarcc1P97496 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Smarcc1P97496 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Smarcc1P97496 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.78■□□□□ 0.12
Smarcc1P97496 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smarcc1P97496 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smarcc1P97496 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.78■□□□□ 0.12
Smarcc1P97496 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Smarcc1P97496 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.78■□□□□ 0.12
Smarcc1P97496 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.78■□□□□ 0.12
Smarcc1P97496 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc1P97496 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Smarcc1P97496 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Gm11989-201ENSMUST00000117240 672 ntBASIC15.77■□□□□ 0.12
Smarcc1P97496 Gm11362-201ENSMUST00000118838 850 ntBASIC15.77■□□□□ 0.12
Smarcc1P97496 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.77■□□□□ 0.12
Smarcc1P97496 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.77■□□□□ 0.12
Smarcc1P97496 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Smarcc1P97496 Gm37246-201ENSMUST00000192665 835 ntBASIC15.77■□□□□ 0.12
Smarcc1P97496 Gm43916-201ENSMUST00000205062 967 ntBASIC15.77■□□□□ 0.12
Smarcc1P97496 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.77■□□□□ 0.12
Smarcc1P97496 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.77■□□□□ 0.12
Smarcc1P97496 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc1P97496 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcc1P97496 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcc1P97496 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
Smarcc1P97496 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Smarcc1P97496 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Smarcc1P97496 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.77■□□□□ 0.11
Smarcc1P97496 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcc1P97496 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Smarcc1P97496 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Smarcc1P97496 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Smarcc1P97496 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm22133-201ENSMUST00000102082 109 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm4993-201ENSMUST00000118719 1174 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm8194-201ENSMUST00000159783 859 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm17391-201ENSMUST00000171036 126 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.76■□□□□ 0.11
Smarcc1P97496 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm17827-201ENSMUST00000211825 742 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
Smarcc1P97496 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Smarcc1P97496 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.76■□□□□ 0.11
Smarcc1P97496 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Smarcc1P97496 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc1P97496 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.76■□□□□ 0.11
Smarcc1P97496 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.75■□□□□ 0.11
Smarcc1P97496 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcc1P97496 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcc1P97496 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Smarcc1P97496 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms