Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Npas1P97459 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Npas1P97459 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.62□□□□□ -0.71
Npas1P97459 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.62□□□□□ -0.71
Npas1P97459 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Gm4875-201ENSMUST00000118257 786 ntBASIC10.62□□□□□ -0.71
Npas1P97459 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.62□□□□□ -0.71
Npas1P97459 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.62□□□□□ -0.71
Npas1P97459 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Npas1P97459 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.62□□□□□ -0.71
Npas1P97459 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Npas1P97459 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.62□□□□□ -0.71
Npas1P97459 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.62□□□□□ -0.71
Npas1P97459 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Npas1P97459 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.62□□□□□ -0.71
Npas1P97459 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.62□□□□□ -0.71
Npas1P97459 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Npas1P97459 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.62□□□□□ -0.71
Npas1P97459 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.62□□□□□ -0.71
Npas1P97459 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.62□□□□□ -0.71
Npas1P97459 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Npas1P97459 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.62□□□□□ -0.71
Npas1P97459 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.62□□□□□ -0.71
Npas1P97459 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Npas1P97459 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.61□□□□□ -0.71
Npas1P97459 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Npas1P97459 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.61□□□□□ -0.71
Npas1P97459 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.61□□□□□ -0.71
Npas1P97459 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.61□□□□□ -0.71
Npas1P97459 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.61□□□□□ -0.71
Npas1P97459 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.61□□□□□ -0.71
Npas1P97459 Gm27680-201ENSMUST00000184192 160 ntBASIC10.61□□□□□ -0.71
Npas1P97459 Gm27772-201ENSMUST00000184900 187 ntBASIC10.61□□□□□ -0.71
Npas1P97459 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.61□□□□□ -0.71
Npas1P97459 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.61□□□□□ -0.71
Npas1P97459 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Npas1P97459 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Npas1P97459 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Npas1P97459 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Npas1P97459 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Npas1P97459 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Npas1P97459 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Npas1P97459 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Npas1P97459 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Npas1P97459 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Npas1P97459 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Npas1P97459 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Npas1P97459 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Npas1P97459 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Npas1P97459 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms