Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm22763-201ENSMUST00000158374 107 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Gm26957-201ENSMUST00000182645 977 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Gm6606-201ENSMUST00000193613 947 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
PrkdcP97313 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
PrkdcP97313 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC8.31□□□□□ -1.08
PrkdcP97313 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 Mir744-201ENSMUST00000103261 100 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Gm13445-201ENSMUST00000121664 307 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Gm5335-201ENSMUST00000182995 1000 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm8384-201ENSMUST00000190905 704 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 AC138604.1-201ENSMUST00000226969 739 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm42432-201ENSMUST00000197902 1617 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
PrkdcP97313 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm8152-201ENSMUST00000120842 637 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC8.31□□□□□ -1.08
PrkdcP97313 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC8.31□□□□□ -1.08
PrkdcP97313 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm10152-201ENSMUST00000193475 1344 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Sorbs3-204ENSMUST00000227929 2460 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PrkdcP97313 Gm42689-201ENSMUST00000202403 404 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC8.31□□□□□ -1.08
PrkdcP97313 AC113082.1-201ENSMUST00000217324 327 ntBASIC8.31□□□□□ -1.08
PrkdcP97313 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC8.3□□□□□ -1.08
PrkdcP97313 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC8.3□□□□□ -1.08
PrkdcP97313 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms