Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43bP86448 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trim43bP86448 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trim43bP86448 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43bP86448 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.02□□□□□ -0.33
Trim43bP86448 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trim43bP86448 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim43bP86448 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim43bP86448 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.02□□□□□ -0.33
Trim43bP86448 Gm26315-201ENSMUST00000083890 321 ntBASIC13.02□□□□□ -0.33
Trim43bP86448 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim43bP86448 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim43bP86448 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim43bP86448 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.02□□□□□ -0.33
Trim43bP86448 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim43bP86448 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Trim43bP86448 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim43bP86448 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43bP86448 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim43bP86448 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim43bP86448 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim43bP86448 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.01□□□□□ -0.33
Trim43bP86448 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim43bP86448 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trim43bP86448 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.01□□□□□ -0.33
Trim43bP86448 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.01□□□□□ -0.33
Trim43bP86448 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim43bP86448 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.01□□□□□ -0.33
Trim43bP86448 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Gm16372-201ENSMUST00000073088 450 ntBASIC13.01□□□□□ -0.33
Trim43bP86448 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim43bP86448 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim43bP86448 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.01□□□□□ -0.33
Trim43bP86448 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim43bP86448 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43bP86448 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim43bP86448 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trim43bP86448 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim43bP86448 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Zscan30-202ENSMUST00000224144 1458 ntBASIC13□□□□□ -0.33
Trim43bP86448 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13□□□□□ -0.33
Trim43bP86448 Gm10156-201ENSMUST00000122364 462 ntBASIC13□□□□□ -0.33
Trim43bP86448 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13□□□□□ -0.33
Trim43bP86448 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13□□□□□ -0.33
Trim43bP86448 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13□□□□□ -0.33
Trim43bP86448 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13□□□□□ -0.33
Trim43bP86448 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13□□□□□ -0.33
Trim43bP86448 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Trim43bP86448 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim43bP86448 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms