Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cux2P70298 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cux2P70298 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cux2P70298 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cux2P70298 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cux2P70298 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cux2P70298 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cux2P70298 Gm23272-201ENSMUST00000104053 129 ntBASIC20.25■□□□□ 0.83
Cux2P70298 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cux2P70298 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC20.25■□□□□ 0.83
Cux2P70298 Gm38117-201ENSMUST00000194653 939 ntBASIC20.25■□□□□ 0.83
Cux2P70298 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC20.25■□□□□ 0.83
Cux2P70298 Gm44711-201ENSMUST00000205414 1264 ntBASIC20.25■□□□□ 0.83
Cux2P70298 Gm18514-201ENSMUST00000218980 436 ntBASIC20.25■□□□□ 0.83
Cux2P70298 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC20.25■□□□□ 0.83
Cux2P70298 CT573086.4-201ENSMUST00000226729 342 ntBASIC20.25■□□□□ 0.83
Cux2P70298 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cux2P70298 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC20.25■□□□□ 0.83
Cux2P70298 Gm5451-201ENSMUST00000080545 579 ntBASIC20.25■□□□□ 0.83
Cux2P70298 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cux2P70298 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cux2P70298 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cux2P70298 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cux2P70298 Gm11660-201ENSMUST00000120955 412 ntBASIC20.24■□□□□ 0.83
Cux2P70298 Gm19587-201ENSMUST00000191395 545 ntBASIC20.24■□□□□ 0.83
Cux2P70298 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cux2P70298 AC154572.1-201ENSMUST00000226098 1204 ntBASIC20.24■□□□□ 0.83
Cux2P70298 Lgi3-203ENSMUST00000226548 1001 ntBASIC20.24■□□□□ 0.83
Cux2P70298 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 AC166836.1-201ENSMUST00000219933 1795 ntBASIC20.24■□□□□ 0.83
Cux2P70298 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Cux2P70298 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cux2P70298 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cux2P70298 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cux2P70298 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cux2P70298 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cux2P70298 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cux2P70298 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Gm5639-201ENSMUST00000122305 2403 ntBASIC20.23■□□□□ 0.83
Cux2P70298 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
Cux2P70298 Gm5641-201ENSMUST00000091130 1488 ntBASIC20.23■□□□□ 0.83
Cux2P70298 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Gm44401-201ENSMUST00000204462 2375 ntBASIC20.23■□□□□ 0.83
Cux2P70298 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC20.23■□□□□ 0.83
Cux2P70298 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC20.23■□□□□ 0.83
Cux2P70298 Gm18968-201ENSMUST00000221319 862 ntBASIC20.23■□□□□ 0.83
Cux2P70298 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Gm18782-201ENSMUST00000209023 1399 ntBASIC20.23■□□□□ 0.83
Cux2P70298 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cux2P70298 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cux2P70298 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Cux2P70298 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC20.22■□□□□ 0.83
Cux2P70298 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cux2P70298 Gm15003-201ENSMUST00000118884 446 ntBASIC20.22■□□□□ 0.83
Cux2P70298 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Gm43912-201ENSMUST00000204352 538 ntBASIC20.22■□□□□ 0.83
Cux2P70298 Gm40879-201ENSMUST00000220759 612 ntBASIC20.22■□□□□ 0.83
Cux2P70298 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC20.22■□□□□ 0.83
Cux2P70298 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC20.22■□□□□ 0.83
Cux2P70298 n-R5s185-201ENSMUST00000083953 119 ntBASIC20.22■□□□□ 0.83
Cux2P70298 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cux2P70298 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cux2P70298 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cux2P70298 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms