Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hmgb1P63158 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.94□□□□□ -0.18
Hmgb1P63158 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Gm12203-201ENSMUST00000118235 598 ntBASIC13.94□□□□□ -0.18
Hmgb1P63158 Gm12209-201ENSMUST00000120089 596 ntBASIC13.94□□□□□ -0.18
Hmgb1P63158 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Hmgb1P63158 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Gm24196-201ENSMUST00000179161 110 ntBASIC13.94□□□□□ -0.18
Hmgb1P63158 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Hmgb1P63158 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Hmgb1P63158 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.94□□□□□ -0.18
Hmgb1P63158 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgb1P63158 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Hmgb1P63158 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.93□□□□□ -0.18
Hmgb1P63158 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Hmgb1P63158 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.93□□□□□ -0.18
Hmgb1P63158 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hmgb1P63158 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.93□□□□□ -0.18
Hmgb1P63158 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.93□□□□□ -0.18
Hmgb1P63158 Gm11814-201ENSMUST00000119515 929 ntBASIC13.93□□□□□ -0.18
Hmgb1P63158 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.93□□□□□ -0.18
Hmgb1P63158 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.93□□□□□ -0.18
Hmgb1P63158 Gm9002-201ENSMUST00000178437 499 ntBASIC13.93□□□□□ -0.18
Hmgb1P63158 Gm27892-201ENSMUST00000185017 106 ntBASIC13.93□□□□□ -0.18
Hmgb1P63158 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.93□□□□□ -0.18
Hmgb1P63158 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.93□□□□□ -0.18
Hmgb1P63158 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.93□□□□□ -0.18
Hmgb1P63158 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Hmgb1P63158 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hmgb1P63158 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.93□□□□□ -0.18
Hmgb1P63158 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgb1P63158 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hmgb1P63158 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hmgb1P63158 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Hmgb1P63158 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.92□□□□□ -0.18
Hmgb1P63158 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Gm13369-201ENSMUST00000119442 987 ntBASIC13.92□□□□□ -0.18
Hmgb1P63158 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.92□□□□□ -0.18
Hmgb1P63158 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Gm4768-201ENSMUST00000206199 686 ntBASIC13.92□□□□□ -0.18
Hmgb1P63158 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.92□□□□□ -0.18
Hmgb1P63158 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.92□□□□□ -0.18
Hmgb1P63158 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgb1P63158 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13.92□□□□□ -0.18
Hmgb1P63158 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms