Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Crnkl1P63154 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Gm3222-201ENSMUST00000071282 990 ntBASIC12.52□□□□□ -0.41
Crnkl1P63154 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Crnkl1P63154 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Crnkl1P63154 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.52□□□□□ -0.41
Crnkl1P63154 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.52□□□□□ -0.41
Crnkl1P63154 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Crnkl1P63154 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.52□□□□□ -0.41
Crnkl1P63154 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.52□□□□□ -0.41
Crnkl1P63154 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.52□□□□□ -0.41
Crnkl1P63154 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Crnkl1P63154 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.52□□□□□ -0.41
Crnkl1P63154 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Crnkl1P63154 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.51□□□□□ -0.41
Crnkl1P63154 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Crnkl1P63154 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Crnkl1P63154 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.51□□□□□ -0.41
Crnkl1P63154 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Crnkl1P63154 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Gm7488-201ENSMUST00000117148 684 ntBASIC12.51□□□□□ -0.41
Crnkl1P63154 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.51□□□□□ -0.41
Crnkl1P63154 Gm21854-201ENSMUST00000179901 471 ntBASIC12.51□□□□□ -0.41
Crnkl1P63154 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.51□□□□□ -0.41
Crnkl1P63154 Gm6218-201ENSMUST00000219812 628 ntBASIC12.51□□□□□ -0.41
Crnkl1P63154 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Crnkl1P63154 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.51□□□□□ -0.41
Crnkl1P63154 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.51□□□□□ -0.41
Crnkl1P63154 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crnkl1P63154 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Crnkl1P63154 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.5□□□□□ -0.41
Crnkl1P63154 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.5□□□□□ -0.41
Crnkl1P63154 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms