Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.94□□□□□ -0.34
Ybx1P62960 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ybx1P62960 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.94□□□□□ -0.34
Ybx1P62960 Rprl1-202ENSMUST00000198476 238 ntBASIC12.94□□□□□ -0.34
Ybx1P62960 Gm44100-201ENSMUST00000204329 436 ntBASIC12.94□□□□□ -0.34
Ybx1P62960 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Gm45433-201ENSMUST00000209386 247 ntBASIC12.94□□□□□ -0.34
Ybx1P62960 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.94□□□□□ -0.34
Ybx1P62960 Gm8959-201ENSMUST00000213150 571 ntBASIC12.94□□□□□ -0.34
Ybx1P62960 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ybx1P62960 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.94□□□□□ -0.34
Ybx1P62960 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ybx1P62960 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Ybx1P62960 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Ybx1P62960 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.93□□□□□ -0.34
Ybx1P62960 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ybx1P62960 Gm13315-201ENSMUST00000120376 991 ntBASIC12.93□□□□□ -0.34
Ybx1P62960 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ybx1P62960 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ybx1P62960 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ybx1P62960 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Ybx1P62960 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.92□□□□□ -0.34
Ybx1P62960 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.92□□□□□ -0.34
Ybx1P62960 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ybx1P62960 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ybx1P62960 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Gm11597-201ENSMUST00000121423 964 ntBASIC12.92□□□□□ -0.34
Ybx1P62960 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.92□□□□□ -0.34
Ybx1P62960 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ybx1P62960 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.92□□□□□ -0.34
Ybx1P62960 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.92□□□□□ -0.34
Ybx1P62960 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ybx1P62960 Gm37666-201ENSMUST00000194110 866 ntBASIC12.92□□□□□ -0.34
Ybx1P62960 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.92□□□□□ -0.34
Ybx1P62960 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.92□□□□□ -0.34
Ybx1P62960 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ybx1P62960 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.92□□□□□ -0.34
Ybx1P62960 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.92□□□□□ -0.34
Ybx1P62960 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.92□□□□□ -0.34
Ybx1P62960 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ybx1P62960 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms