Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.11□□□□□ -0.63
Lsm6P62313 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.11□□□□□ -0.63
Lsm6P62313 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.1□□□□□ -0.63
Lsm6P62313 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.1□□□□□ -0.63
Lsm6P62313 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.1□□□□□ -0.63
Lsm6P62313 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lsm6P62313 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lsm6P62313 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lsm6P62313 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.1□□□□□ -0.63
Lsm6P62313 Gm13492-201ENSMUST00000119772 665 ntBASIC11.1□□□□□ -0.63
Lsm6P62313 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.1□□□□□ -0.63
Lsm6P62313 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.1□□□□□ -0.63
Lsm6P62313 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.1□□□□□ -0.63
Lsm6P62313 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.1□□□□□ -0.63
Lsm6P62313 Gm38092-201ENSMUST00000195600 653 ntBASIC11.1□□□□□ -0.63
Lsm6P62313 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.1□□□□□ -0.63
Lsm6P62313 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Lsm6P62313 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lsm6P62313 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lsm6P62313 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm6P62313 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lsm6P62313 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.09□□□□□ -0.63
Lsm6P62313 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.09□□□□□ -0.63
Lsm6P62313 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.09□□□□□ -0.63
Lsm6P62313 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lsm6P62313 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.09□□□□□ -0.63
Lsm6P62313 Gm12384-201ENSMUST00000119228 919 ntBASIC11.09□□□□□ -0.63
Lsm6P62313 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.09□□□□□ -0.63
Lsm6P62313 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.09□□□□□ -0.63
Lsm6P62313 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.09□□□□□ -0.63
Lsm6P62313 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.09□□□□□ -0.63
Lsm6P62313 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm6P62313 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Lsm6P62313 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms