Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.27□□□□□ -0.61
Rpl27P61358 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.27□□□□□ -0.61
Rpl27P61358 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.27□□□□□ -0.61
Rpl27P61358 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rpl27P61358 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rpl27P61358 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.27□□□□□ -0.61
Rpl27P61358 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.27□□□□□ -0.61
Rpl27P61358 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.27□□□□□ -0.61
Rpl27P61358 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.27□□□□□ -0.61
Rpl27P61358 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.27□□□□□ -0.61
Rpl27P61358 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl27P61358 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rpl27P61358 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Rpl27P61358 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.26□□□□□ -0.61
Rpl27P61358 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Rpl27P61358 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.26□□□□□ -0.61
Rpl27P61358 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.26□□□□□ -0.61
Rpl27P61358 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rpl27P61358 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.26□□□□□ -0.61
Rpl27P61358 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.26□□□□□ -0.61
Rpl27P61358 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Gm10268-201ENSMUST00000085340 555 ntBASIC11.26□□□□□ -0.61
Rpl27P61358 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Rpl27P61358 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.26□□□□□ -0.61
Rpl27P61358 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.26□□□□□ -0.61
Rpl27P61358 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.26□□□□□ -0.61
Rpl27P61358 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
Rpl27P61358 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.26□□□□□ -0.61
Rpl27P61358 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rpl27P61358 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl27P61358 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rpl27P61358 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl27P61358 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl27P61358 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rpl27P61358 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Rpl27P61358 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpl27P61358 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rpl27P61358 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rpl27P61358 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl27P61358 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl27P61358 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl27P61358 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Rpl27P61358 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rpl27P61358 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl27P61358 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl27P61358 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl27P61358 Gm14760-201ENSMUST00000121831 999 ntBASIC11.25□□□□□ -0.61
Rpl27P61358 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rpl27P61358 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rpl27P61358 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl27P61358 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl27P61358 Gm29127-201ENSMUST00000188304 517 ntBASIC11.25□□□□□ -0.61
Rpl27P61358 Gm38092-201ENSMUST00000195600 653 ntBASIC11.25□□□□□ -0.61
Rpl27P61358 Gm19184-201ENSMUST00000196798 928 ntBASIC11.25□□□□□ -0.61
Rpl27P61358 Gm43818-201ENSMUST00000200605 466 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms