Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Nup43P59235 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Mir1247-201ENSMUST00000116706 82 ntBASIC11.93□□□□□ -0.5
Nup43P59235 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.93□□□□□ -0.5
Nup43P59235 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.93□□□□□ -0.5
Nup43P59235 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.93□□□□□ -0.5
Nup43P59235 Gm28196-201ENSMUST00000187719 640 ntBASIC11.93□□□□□ -0.5
Nup43P59235 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.93□□□□□ -0.5
Nup43P59235 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Nup43P59235 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.93□□□□□ -0.5
Nup43P59235 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nup43P59235 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nup43P59235 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Nup43P59235 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.93□□□□□ -0.5
Nup43P59235 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.93□□□□□ -0.5
Nup43P59235 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.93□□□□□ -0.5
Nup43P59235 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Nup43P59235 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup43P59235 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.93□□□□□ -0.5
Nup43P59235 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nup43P59235 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nup43P59235 Gm15703-201ENSMUST00000120250 880 ntBASIC11.92□□□□□ -0.5
Nup43P59235 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.92□□□□□ -0.5
Nup43P59235 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.92□□□□□ -0.5
Nup43P59235 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Gm42693-201ENSMUST00000196779 631 ntBASIC11.92□□□□□ -0.5
Nup43P59235 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.92□□□□□ -0.5
Nup43P59235 Gm44405-201ENSMUST00000198952 126 ntBASIC11.92□□□□□ -0.5
Nup43P59235 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.92□□□□□ -0.5
Nup43P59235 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Gm6013-201ENSMUST00000212264 699 ntBASIC11.92□□□□□ -0.5
Nup43P59235 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.92□□□□□ -0.5
Nup43P59235 Gm45925-201ENSMUST00000218882 744 ntBASIC11.92□□□□□ -0.5
Nup43P59235 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.92□□□□□ -0.5
Nup43P59235 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nup43P59235 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.92□□□□□ -0.5
Nup43P59235 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.92□□□□□ -0.5
Nup43P59235 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nup43P59235 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Nup43P59235 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nup43P59235 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nup43P59235 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nup43P59235 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nup43P59235 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nup43P59235 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nup43P59235 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup43P59235 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms