Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.54□□□□□ -0.08
Tpm2P58774 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Tpm2P58774 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tpm2P58774 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.53□□□□□ -0.08
Tpm2P58774 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
Tpm2P58774 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tpm2P58774 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.53□□□□□ -0.08
Tpm2P58774 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.53□□□□□ -0.08
Tpm2P58774 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Tpm2P58774 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.53□□□□□ -0.08
Tpm2P58774 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tpm2P58774 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.53□□□□□ -0.08
Tpm2P58774 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.53□□□□□ -0.08
Tpm2P58774 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tpm2P58774 Gm43094-201ENSMUST00000196549 921 ntBASIC14.53□□□□□ -0.08
Tpm2P58774 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.53□□□□□ -0.08
Tpm2P58774 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.53□□□□□ -0.08
Tpm2P58774 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.53□□□□□ -0.08
Tpm2P58774 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.53□□□□□ -0.08
Tpm2P58774 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tpm2P58774 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Gm36987-201ENSMUST00000194704 2979 ntBASIC14.53□□□□□ -0.08
Tpm2P58774 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tpm2P58774 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm2P58774 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.53□□□□□ -0.08
Tpm2P58774 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Tpm2P58774 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm2P58774 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm2P58774 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm2P58774 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.52□□□□□ -0.08
Tpm2P58774 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm2P58774 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Tpm2P58774 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm2P58774 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.52□□□□□ -0.08
Tpm2P58774 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm2P58774 Gm11524-201ENSMUST00000119349 807 ntBASIC14.52□□□□□ -0.09
Tpm2P58774 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.52□□□□□ -0.09
Tpm2P58774 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.52□□□□□ -0.09
Tpm2P58774 Gm5279-201ENSMUST00000199575 745 ntBASIC14.52□□□□□ -0.09
Tpm2P58774 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.52□□□□□ -0.09
Tpm2P58774 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Tpm2P58774 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Tpm2P58774 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm2P58774 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.52□□□□□ -0.09
Tpm2P58774 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm2P58774 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.51□□□□□ -0.09
Tpm2P58774 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm2P58774 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm2P58774 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm2P58774 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm2P58774 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm2P58774 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC14.51□□□□□ -0.09
Tpm2P58774 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC14.51□□□□□ -0.09
Tpm2P58774 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm2P58774 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tpm2P58774 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tpm2P58774 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm2P58774 Gm27306-201ENSMUST00000183970 107 ntBASIC14.51□□□□□ -0.09
Tpm2P58774 Gm27838-201ENSMUST00000184829 128 ntBASIC14.51□□□□□ -0.09
Tpm2P58774 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.51□□□□□ -0.09
Tpm2P58774 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm2P58774 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms