Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tpm1P58771 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.09□□□□□ -0.15
Tpm1P58771 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tpm1P58771 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Tpm1P58771 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.09□□□□□ -0.15
Tpm1P58771 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.09□□□□□ -0.15
Tpm1P58771 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Tpm1P58771 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.09□□□□□ -0.15
Tpm1P58771 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.09□□□□□ -0.15
Tpm1P58771 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Tpm1P58771 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.08□□□□□ -0.15
Tpm1P58771 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm1P58771 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm1P58771 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm1P58771 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.08□□□□□ -0.16
Tpm1P58771 Gm16202-201ENSMUST00000117532 544 ntBASIC14.08□□□□□ -0.16
Tpm1P58771 Gm27306-201ENSMUST00000183970 107 ntBASIC14.08□□□□□ -0.16
Tpm1P58771 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.08□□□□□ -0.16
Tpm1P58771 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tpm1P58771 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm1P58771 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Tpm1P58771 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm1P58771 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm1P58771 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm1P58771 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm1P58771 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm1P58771 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm1P58771 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.08□□□□□ -0.16
Tpm1P58771 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm1P58771 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.07□□□□□ -0.16
Tpm1P58771 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.07□□□□□ -0.16
Tpm1P58771 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tpm1P58771 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tpm1P58771 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Tpm1P58771 Mir686-201ENSMUST00000102174 109 ntBASIC14.07□□□□□ -0.16
Tpm1P58771 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Tpm1P58771 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.07□□□□□ -0.16
Tpm1P58771 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Gm5354-201ENSMUST00000182417 973 ntBASIC14.07□□□□□ -0.16
Tpm1P58771 Gm27989-201ENSMUST00000184721 107 ntBASIC14.07□□□□□ -0.16
Tpm1P58771 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.07□□□□□ -0.16
Tpm1P58771 Gm29667-201ENSMUST00000190817 490 ntBASIC14.07□□□□□ -0.16
Tpm1P58771 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm1P58771 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.06□□□□□ -0.16
Tpm1P58771 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tpm1P58771 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms