Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Gm2423-201ENSMUST00000074863 733 ntBASIC14.28□□□□□ -0.12
Usp25P57080 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp25P57080 Mir339-201ENSMUST00000083659 96 ntBASIC14.28□□□□□ -0.12
Usp25P57080 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp25P57080 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp25P57080 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp25P57080 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp25P57080 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp25P57080 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp25P57080 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp25P57080 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp25P57080 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Usp25P57080 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp25P57080 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp25P57080 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp25P57080 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.27□□□□□ -0.12
Usp25P57080 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp25P57080 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp25P57080 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.27□□□□□ -0.12
Usp25P57080 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.27□□□□□ -0.12
Usp25P57080 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp25P57080 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.27□□□□□ -0.13
Usp25P57080 Gm14760-201ENSMUST00000121831 999 ntBASIC14.27□□□□□ -0.13
Usp25P57080 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Usp25P57080 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.27□□□□□ -0.13
Usp25P57080 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp25P57080 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.27□□□□□ -0.13
Usp25P57080 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp25P57080 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp25P57080 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.27□□□□□ -0.13
Usp25P57080 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp25P57080 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Usp25P57080 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp25P57080 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp25P57080 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp25P57080 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Gm5687-201ENSMUST00000118252 640 ntBASIC14.26□□□□□ -0.13
Usp25P57080 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp25P57080 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.26□□□□□ -0.13
Usp25P57080 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.26□□□□□ -0.13
Usp25P57080 Itm2b-204ENSMUST00000228637 783 ntBASIC14.26□□□□□ -0.13
Usp25P57080 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Usp25P57080 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp25P57080 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Usp25P57080 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp25P57080 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms