Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.12□□□□□ -0.47
Ube2e3P52483 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube2e3P52483 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Ube2e3P52483 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube2e3P52483 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube2e3P52483 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.12□□□□□ -0.47
Ube2e3P52483 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube2e3P52483 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube2e3P52483 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube2e3P52483 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ube2e3P52483 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Ube2e3P52483 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ube2e3P52483 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.12□□□□□ -0.47
Ube2e3P52483 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube2e3P52483 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube2e3P52483 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ube2e3P52483 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.11□□□□□ -0.47
Ube2e3P52483 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.11□□□□□ -0.47
Ube2e3P52483 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Gm5904-201ENSMUST00000210286 865 ntBASIC12.11□□□□□ -0.47
Ube2e3P52483 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.11□□□□□ -0.47
Ube2e3P52483 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.11□□□□□ -0.47
Ube2e3P52483 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.11□□□□□ -0.47
Ube2e3P52483 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ube2e3P52483 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ube2e3P52483 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.11□□□□□ -0.47
Ube2e3P52483 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.11□□□□□ -0.47
Ube2e3P52483 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube2e3P52483 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.1□□□□□ -0.47
Ube2e3P52483 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ube2e3P52483 Gm13829-201ENSMUST00000119600 138 ntBASIC12.1□□□□□ -0.47
Ube2e3P52483 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.1□□□□□ -0.47
Ube2e3P52483 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Rmrp-201ENSMUST00000157463 271 ntBASIC12.1□□□□□ -0.47
Ube2e3P52483 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Gm25927-201ENSMUST00000175058 117 ntBASIC12.1□□□□□ -0.47
Ube2e3P52483 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ube2e3P52483 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.1□□□□□ -0.47
Ube2e3P52483 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.1□□□□□ -0.47
Ube2e3P52483 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.1□□□□□ -0.47
Ube2e3P52483 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.1□□□□□ -0.47
Ube2e3P52483 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.1□□□□□ -0.47
Ube2e3P52483 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.1□□□□□ -0.47
Ube2e3P52483 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ube2e3P52483 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.1□□□□□ -0.47
Ube2e3P52483 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ube2e3P52483 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.1□□□□□ -0.47
Ube2e3P52483 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ube2e3P52483 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ube2e3P52483 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube2e3P52483 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms