Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atoh1P48985 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atoh1P48985 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atoh1P48985 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atoh1P48985 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atoh1P48985 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atoh1P48985 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atoh1P48985 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atoh1P48985 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atoh1P48985 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.21□□□□□ -0.14
Atoh1P48985 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.21□□□□□ -0.14
Atoh1P48985 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.21□□□□□ -0.14
Atoh1P48985 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atoh1P48985 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atoh1P48985 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Atoh1P48985 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Atoh1P48985 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Atoh1P48985 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Atoh1P48985 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.2□□□□□ -0.14
Atoh1P48985 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.2□□□□□ -0.14
Atoh1P48985 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Atoh1P48985 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.2□□□□□ -0.14
Atoh1P48985 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.2□□□□□ -0.14
Atoh1P48985 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.2□□□□□ -0.14
Atoh1P48985 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.2□□□□□ -0.14
Atoh1P48985 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.2□□□□□ -0.14
Atoh1P48985 Gm34023-201ENSMUST00000195539 217 ntBASIC14.2□□□□□ -0.14
Atoh1P48985 Gm44958-201ENSMUST00000203734 736 ntBASIC14.2□□□□□ -0.14
Atoh1P48985 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Atoh1P48985 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.2□□□□□ -0.14
Atoh1P48985 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.2□□□□□ -0.14
Atoh1P48985 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.2□□□□□ -0.14
Atoh1P48985 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Gm10288-201ENSMUST00000084614 537 ntBASIC14.2□□□□□ -0.14
Atoh1P48985 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.2□□□□□ -0.14
Atoh1P48985 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Atoh1P48985 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atoh1P48985 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Atoh1P48985 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.19□□□□□ -0.14
Atoh1P48985 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.19□□□□□ -0.14
Atoh1P48985 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atoh1P48985 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Gm13809-201ENSMUST00000117921 597 ntBASIC14.19□□□□□ -0.14
Atoh1P48985 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.19□□□□□ -0.14
Atoh1P48985 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.19□□□□□ -0.14
Atoh1P48985 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Atoh1P48985 Gm27530-201ENSMUST00000184096 98 ntBASIC14.19□□□□□ -0.14
Atoh1P48985 Gm37905-201ENSMUST00000195310 341 ntBASIC14.19□□□□□ -0.14
Atoh1P48985 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
Atoh1P48985 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.19□□□□□ -0.14
Atoh1P48985 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.19□□□□□ -0.14
Atoh1P48985 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.19□□□□□ -0.14
Atoh1P48985 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Atoh1P48985 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Atoh1P48985 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Atoh1P48985 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.19□□□□□ -0.14
Atoh1P48985 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atoh1P48985 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atoh1P48985 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atoh1P48985 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atoh1P48985 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atoh1P48985 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Atoh1P48985 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atoh1P48985 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Atoh1P48985 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atoh1P48985 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atoh1P48985 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms