Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.1□□□□□ -0.63
GdnfP48540 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.1□□□□□ -0.63
GdnfP48540 Gm14363-201ENSMUST00000122304 409 ntBASIC11.1□□□□□ -0.63
GdnfP48540 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC11.1□□□□□ -0.63
GdnfP48540 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
GdnfP48540 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.1□□□□□ -0.63
GdnfP48540 Gm18018-201ENSMUST00000198273 408 ntBASIC11.1□□□□□ -0.63
GdnfP48540 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
GdnfP48540 Gm9908-201ENSMUST00000211534 448 ntBASIC11.1□□□□□ -0.63
GdnfP48540 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.1□□□□□ -0.63
GdnfP48540 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.1□□□□□ -0.63
GdnfP48540 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.1□□□□□ -0.63
GdnfP48540 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
GdnfP48540 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
GdnfP48540 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
GdnfP48540 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
GdnfP48540 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
GdnfP48540 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.09□□□□□ -0.63
GdnfP48540 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.09□□□□□ -0.63
GdnfP48540 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.09□□□□□ -0.63
GdnfP48540 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Gm12849-201ENSMUST00000120013 739 ntBASIC11.09□□□□□ -0.63
GdnfP48540 Gm12138-201ENSMUST00000122180 951 ntBASIC11.09□□□□□ -0.63
GdnfP48540 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.09□□□□□ -0.63
GdnfP48540 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.09□□□□□ -0.63
GdnfP48540 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
GdnfP48540 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.09□□□□□ -0.63
GdnfP48540 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.09□□□□□ -0.63
GdnfP48540 Gm38223-201ENSMUST00000194484 695 ntBASIC11.09□□□□□ -0.63
GdnfP48540 Gm6745-201ENSMUST00000199216 526 ntBASIC11.09□□□□□ -0.63
GdnfP48540 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.09□□□□□ -0.63
GdnfP48540 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC11.09□□□□□ -0.63
GdnfP48540 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.09□□□□□ -0.63
GdnfP48540 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
GdnfP48540 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.09□□□□□ -0.63
GdnfP48540 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
GdnfP48540 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
GdnfP48540 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
GdnfP48540 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.09□□□□□ -0.63
GdnfP48540 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
GdnfP48540 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
GdnfP48540 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
GdnfP48540 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
GdnfP48540 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
GdnfP48540 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
GdnfP48540 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.08□□□□□ -0.64
GdnfP48540 Gm15429-201ENSMUST00000151268 798 ntBASIC11.08□□□□□ -0.64
GdnfP48540 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms