Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.14■□□□□ 0.01
Nedd4P46935 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.14■□□□□ 0.01
Nedd4P46935 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.14■□□□□ 0.01
Nedd4P46935 Gm11801-201ENSMUST00000117807 746 ntBASIC15.14■□□□□ 0.01
Nedd4P46935 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.14■□□□□ 0.01
Nedd4P46935 Gm12969-201ENSMUST00000120199 1004 ntBASIC15.14■□□□□ 0.01
Nedd4P46935 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.14■□□□□ 0.01
Nedd4P46935 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.14■□□□□ 0.01
Nedd4P46935 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.14■□□□□ 0.01
Nedd4P46935 Gm20392-201ENSMUST00000173047 701 ntBASIC15.14■□□□□ 0.01
Nedd4P46935 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Gm8100-201ENSMUST00000182906 988 ntBASIC15.14■□□□□ 0.01
Nedd4P46935 Gm27910-201ENSMUST00000185004 107 ntBASIC15.14■□□□□ 0.01
Nedd4P46935 Gm42518-201ENSMUST00000196277 938 ntBASIC15.14■□□□□ 0.01
Nedd4P46935 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.14■□□□□ 0.01
Nedd4P46935 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.14■□□□□ 0.01
Nedd4P46935 AC159376.1-201ENSMUST00000218504 630 ntBASIC15.14■□□□□ 0.01
Nedd4P46935 Mirlet7i-201ENSMUST00000083472 85 ntBASIC15.14■□□□□ 0.01
Nedd4P46935 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nedd4P46935 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.14■□□□□ 0.01
Nedd4P46935 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nedd4P46935 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.14■□□□□ 0.01
Nedd4P46935 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd4P46935 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Nedd4P46935 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nedd4P46935 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.13■□□□□ 0.01
Nedd4P46935 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nedd4P46935 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.13■□□□□ 0.01
Nedd4P46935 Gm8199-201ENSMUST00000121323 823 ntBASIC15.13■□□□□ 0.01
Nedd4P46935 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.13■□□□□ 0.01
Nedd4P46935 Gm22144-201ENSMUST00000157402 102 ntBASIC15.13■□□□□ 0.01
Nedd4P46935 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.13■□□□□ 0.01
Nedd4P46935 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC15.13■□□□□ 0.01
Nedd4P46935 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Nedd4P46935 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Nedd4P46935 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nedd4P46935 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.13■□□□□ 0.01
Nedd4P46935 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Nedd4P46935 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd4P46935 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.13■□□□□ 0.01
Nedd4P46935 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Nedd4P46935 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.12■□□□□ 0.01
Nedd4P46935 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nedd4P46935 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.12■□□□□ 0.01
Nedd4P46935 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.12■□□□□ 0.01
Nedd4P46935 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
Nedd4P46935 Gm4879-201ENSMUST00000122190 1272 ntBASIC15.12■□□□□ 0.01
Nedd4P46935 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.12■□□□□ 0.01
Nedd4P46935 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Nedd4P46935 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd4P46935 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC15.12■□□□□ 0.01
Nedd4P46935 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC15.12■□□□□ 0.01
Nedd4P46935 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms