Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.68□□□□□ -0.7
Hist1h1dP43277 Gm14760-201ENSMUST00000121831 999 ntBASIC10.68□□□□□ -0.7
Hist1h1dP43277 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Mir7023-201ENSMUST00000185093 64 ntBASIC10.68□□□□□ -0.7
Hist1h1dP43277 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Gm20949-201ENSMUST00000206478 952 ntBASIC10.68□□□□□ -0.7
Hist1h1dP43277 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.67□□□□□ -0.7
Hist1h1dP43277 Gm8099-201ENSMUST00000200510 742 ntBASIC10.67□□□□□ -0.7
Hist1h1dP43277 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Gm8227-201ENSMUST00000223306 571 ntBASIC10.67□□□□□ -0.7
Hist1h1dP43277 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.67□□□□□ -0.7
Hist1h1dP43277 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.67□□□□□ -0.7
Hist1h1dP43277 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.67□□□□□ -0.7
Hist1h1dP43277 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1dP43277 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1dP43277 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1dP43277 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1dP43277 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1dP43277 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1dP43277 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1dP43277 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1dP43277 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1dP43277 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms