Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm22323-201ENSMUST00000103832 109 ntBASIC12.11□□□□□ -0.47
Tnfsf9P41274 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm11531-201ENSMUST00000117614 555 ntBASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm13875-201ENSMUST00000120162 282 ntBASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm17376-201ENSMUST00000166016 84 ntBASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm8018-201ENSMUST00000173536 789 ntBASIC12.11□□□□□ -0.47
Tnfsf9P41274 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm4857-201ENSMUST00000192718 785 ntBASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfsf9P41274 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.11□□□□□ -0.47
Tnfsf9P41274 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tnfsf9P41274 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.11□□□□□ -0.47
Tnfsf9P41274 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.11□□□□□ -0.47
Tnfsf9P41274 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Tnfsf9P41274 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.1□□□□□ -0.47
Tnfsf9P41274 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Gm16296-201ENSMUST00000159905 325 ntBASIC12.1□□□□□ -0.47
Tnfsf9P41274 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Tnfsf9P41274 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Gm38241-201ENSMUST00000192641 898 ntBASIC12.1□□□□□ -0.47
Tnfsf9P41274 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Gm5950-201ENSMUST00000213337 772 ntBASIC12.1□□□□□ -0.47
Tnfsf9P41274 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.1□□□□□ -0.47
Tnfsf9P41274 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf9P41274 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfsf9P41274 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.09□□□□□ -0.47
Tnfsf9P41274 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf9P41274 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms