Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.24□□□□□ -0.45
TfamP40630 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TfamP40630 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
TfamP40630 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.24□□□□□ -0.45
TfamP40630 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TfamP40630 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Gm12203-201ENSMUST00000118235 598 ntBASIC12.23□□□□□ -0.45
TfamP40630 Gm12209-201ENSMUST00000120089 596 ntBASIC12.23□□□□□ -0.45
TfamP40630 Mir1894-201ENSMUST00000122802 81 ntBASIC12.23□□□□□ -0.45
TfamP40630 Gm17208-201ENSMUST00000168388 535 ntBASIC12.23□□□□□ -0.45
TfamP40630 Gm6244-201ENSMUST00000178732 841 ntBASIC12.23□□□□□ -0.45
TfamP40630 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.23□□□□□ -0.45
TfamP40630 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.23□□□□□ -0.45
TfamP40630 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.23□□□□□ -0.45
TfamP40630 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.23□□□□□ -0.45
TfamP40630 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.23□□□□□ -0.45
TfamP40630 Gm5356-201ENSMUST00000093326 615 ntBASIC12.23□□□□□ -0.45
TfamP40630 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.23□□□□□ -0.45
TfamP40630 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TfamP40630 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TfamP40630 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TfamP40630 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TfamP40630 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TfamP40630 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.22□□□□□ -0.45
TfamP40630 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
TfamP40630 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TfamP40630 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.22□□□□□ -0.45
TfamP40630 Gm11637-201ENSMUST00000120601 592 ntBASIC12.22□□□□□ -0.45
TfamP40630 Gm2231-201ENSMUST00000125661 612 ntBASIC12.22□□□□□ -0.45
TfamP40630 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.22□□□□□ -0.45
TfamP40630 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.22□□□□□ -0.45
TfamP40630 Gm23363-201ENSMUST00000175024 79 ntBASIC12.22□□□□□ -0.45
TfamP40630 Gm37497-201ENSMUST00000195830 798 ntBASIC12.22□□□□□ -0.45
TfamP40630 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
TfamP40630 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.22□□□□□ -0.45
TfamP40630 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TfamP40630 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.22□□□□□ -0.45
TfamP40630 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.22□□□□□ -0.45
TfamP40630 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.22□□□□□ -0.45
TfamP40630 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TfamP40630 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms