Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Upk2P38575 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Upk2P38575 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.07□□□□□ -0.64
Upk2P38575 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Upk2P38575 Gm11591-201ENSMUST00000120063 702 ntBASIC11.07□□□□□ -0.64
Upk2P38575 Gm11964-201ENSMUST00000120982 444 ntBASIC11.07□□□□□ -0.64
Upk2P38575 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.07□□□□□ -0.64
Upk2P38575 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Rmrp-201ENSMUST00000157463 271 ntBASIC11.07□□□□□ -0.64
Upk2P38575 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.07□□□□□ -0.64
Upk2P38575 Gm25927-201ENSMUST00000175058 117 ntBASIC11.07□□□□□ -0.64
Upk2P38575 Gm27731-201ENSMUST00000185192 107 ntBASIC11.07□□□□□ -0.64
Upk2P38575 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.07□□□□□ -0.64
Upk2P38575 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.07□□□□□ -0.64
Upk2P38575 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Upk2P38575 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.07□□□□□ -0.64
Upk2P38575 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Upk2P38575 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.07□□□□□ -0.64
Upk2P38575 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.07□□□□□ -0.64
Upk2P38575 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Upk2P38575 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.07□□□□□ -0.64
Upk2P38575 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Upk2P38575 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk2P38575 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Upk2P38575 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Upk2P38575 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk2P38575 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk2P38575 Gm12502-201ENSMUST00000120197 444 ntBASIC11.06□□□□□ -0.64
Upk2P38575 Gm5745-201ENSMUST00000183748 313 ntBASIC11.06□□□□□ -0.64
Upk2P38575 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Upk2P38575 Gm19184-201ENSMUST00000196798 928 ntBASIC11.06□□□□□ -0.64
Upk2P38575 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.06□□□□□ -0.64
Upk2P38575 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk2P38575 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.06□□□□□ -0.64
Upk2P38575 Snora73a-201ENSMUST00000082453 205 ntBASIC11.06□□□□□ -0.64
Upk2P38575 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.06□□□□□ -0.64
Upk2P38575 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Upk2P38575 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Upk2P38575 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Upk2P38575 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.06□□□□□ -0.64
Upk2P38575 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk2P38575 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.05□□□□□ -0.64
Upk2P38575 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Upk2P38575 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.05□□□□□ -0.64
Upk2P38575 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.05□□□□□ -0.64
Upk2P38575 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.05□□□□□ -0.64
Upk2P38575 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Gm15824-201ENSMUST00000119516 955 ntBASIC11.05□□□□□ -0.64
Upk2P38575 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.05□□□□□ -0.64
Upk2P38575 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms