Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PtprkP35822 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PtprkP35822 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PtprkP35822 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PtprkP35822 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC19.72■□□□□ 0.75
PtprkP35822 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PtprkP35822 Gm13549-201ENSMUST00000118339 796 ntBASIC19.72■□□□□ 0.75
PtprkP35822 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PtprkP35822 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PtprkP35822 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
PtprkP35822 Gm18159-201ENSMUST00000174516 1070 ntBASIC19.72■□□□□ 0.75
PtprkP35822 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PtprkP35822 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PtprkP35822 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PtprkP35822 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PtprkP35822 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PtprkP35822 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC19.71■□□□□ 0.75
PtprkP35822 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PtprkP35822 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PtprkP35822 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PtprkP35822 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PtprkP35822 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PtprkP35822 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PtprkP35822 Gm5419-201ENSMUST00000119301 527 ntBASIC19.71■□□□□ 0.75
PtprkP35822 Gm16071-201ENSMUST00000119589 793 ntBASIC19.71■□□□□ 0.75
PtprkP35822 Gm28686-201ENSMUST00000187404 609 ntBASIC19.71■□□□□ 0.75
PtprkP35822 Gm17826-201ENSMUST00000189720 798 ntBASIC19.71■□□□□ 0.75
PtprkP35822 Gm37458-201ENSMUST00000194055 410 ntBASIC19.71■□□□□ 0.75
PtprkP35822 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PtprkP35822 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PtprkP35822 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PtprkP35822 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PtprkP35822 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PtprkP35822 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PtprkP35822 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
PtprkP35822 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC19.7■□□□□ 0.74
PtprkP35822 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC19.7■□□□□ 0.74
PtprkP35822 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Gm22711-201ENSMUST00000116890 133 ntBASIC19.7■□□□□ 0.74
PtprkP35822 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PtprkP35822 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC19.7■□□□□ 0.74
PtprkP35822 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC19.7■□□□□ 0.74
PtprkP35822 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC19.7■□□□□ 0.74
PtprkP35822 Gm5705-201ENSMUST00000066241 711 ntBASIC19.7■□□□□ 0.74
PtprkP35822 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PtprkP35822 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PtprkP35822 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Grk6-205ENSMUST00000224653 2976 ntBASIC19.7■□□□□ 0.74
PtprkP35822 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PtprkP35822 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PtprkP35822 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtprkP35822 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC19.69■□□□□ 0.74
PtprkP35822 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Gm8731-201ENSMUST00000118088 412 ntBASIC19.69■□□□□ 0.74
PtprkP35822 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC19.69■□□□□ 0.74
PtprkP35822 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PtprkP35822 Gm18711-201ENSMUST00000199341 750 ntBASIC19.69■□□□□ 0.74
PtprkP35822 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Gm18204-201ENSMUST00000209835 793 ntBASIC19.69■□□□□ 0.74
PtprkP35822 Gm35713-201ENSMUST00000210516 199 ntBASIC19.69■□□□□ 0.74
PtprkP35822 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 AC126262.1-201ENSMUST00000221802 1904 ntBASIC19.69■□□□□ 0.74
PtprkP35822 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PtprkP35822 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Gm10152-201ENSMUST00000193475 1344 ntBASIC19.69■□□□□ 0.74
PtprkP35822 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtprkP35822 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PtprkP35822 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PtprkP35822 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PtprkP35822 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PtprkP35822 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PtprkP35822 Gm12856-201ENSMUST00000119471 1293 ntBASIC19.68■□□□□ 0.74
PtprkP35822 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PtprkP35822 Gm6485-201ENSMUST00000160676 439 ntBASIC19.68■□□□□ 0.74
PtprkP35822 Ighv2-1-201ENSMUST00000170946 353 ntBASIC19.68■□□□□ 0.74
PtprkP35822 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PtprkP35822 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PtprkP35822 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms