Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Foxa1P35582 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.68□□□□□ -0.54
Foxa1P35582 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.68□□□□□ -0.54
Foxa1P35582 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Foxa1P35582 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Foxa1P35582 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.68□□□□□ -0.54
Foxa1P35582 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Gm13392-201ENSMUST00000117708 150 ntBASIC11.68□□□□□ -0.54
Foxa1P35582 Gm24548-201ENSMUST00000158650 108 ntBASIC11.68□□□□□ -0.54
Foxa1P35582 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.68□□□□□ -0.54
Foxa1P35582 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Foxa1P35582 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.68□□□□□ -0.54
Foxa1P35582 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.68□□□□□ -0.54
Foxa1P35582 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.68□□□□□ -0.54
Foxa1P35582 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Foxa1P35582 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Foxa1P35582 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.68□□□□□ -0.54
Foxa1P35582 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Foxa1P35582 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Foxa1P35582 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Foxa1P35582 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Foxa1P35582 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Foxa1P35582 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.67□□□□□ -0.54
Foxa1P35582 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Foxa1P35582 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Gm15703-201ENSMUST00000120250 880 ntBASIC11.67□□□□□ -0.54
Foxa1P35582 Gm11964-201ENSMUST00000120982 444 ntBASIC11.67□□□□□ -0.54
Foxa1P35582 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Gm18054-201ENSMUST00000207539 555 ntBASIC11.67□□□□□ -0.54
Foxa1P35582 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Foxa1P35582 Gm10478-201ENSMUST00000084451 396 ntBASIC11.67□□□□□ -0.54
Foxa1P35582 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Foxa1P35582 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.67□□□□□ -0.54
Foxa1P35582 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Foxa1P35582 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Foxa1P35582 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms