Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc6a1P31648 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gm15460-201ENSMUST00000118147 391 ntBASIC10.88□□□□□ -0.67
Slc6a1P31648 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gm6916-202ENSMUST00000205523 195 ntBASIC10.88□□□□□ -0.67
Slc6a1P31648 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gm2423-201ENSMUST00000074863 733 ntBASIC10.88□□□□□ -0.67
Slc6a1P31648 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.88□□□□□ -0.67
Slc6a1P31648 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Slc6a1P31648 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.87□□□□□ -0.67
Slc6a1P31648 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Gm22189-201ENSMUST00000103822 86 ntBASIC10.87□□□□□ -0.67
Slc6a1P31648 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Gm6912-201ENSMUST00000117218 544 ntBASIC10.87□□□□□ -0.67
Slc6a1P31648 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.87□□□□□ -0.67
Slc6a1P31648 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.87□□□□□ -0.67
Slc6a1P31648 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.87□□□□□ -0.67
Slc6a1P31648 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Gm24420-201ENSMUST00000176676 59 ntBASIC10.87□□□□□ -0.67
Slc6a1P31648 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Slc6a1P31648 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Gm8515-201ENSMUST00000194852 576 ntBASIC10.87□□□□□ -0.67
Slc6a1P31648 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.87□□□□□ -0.67
Slc6a1P31648 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Slc6a1P31648 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms