Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcam1P29533 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Vcam1P29533 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcam1P29533 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcam1P29533 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.46□□□□□ -0.09
Vcam1P29533 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.46□□□□□ -0.09
Vcam1P29533 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Vcam1P29533 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcam1P29533 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vcam1P29533 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Vcam1P29533 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.46□□□□□ -0.09
Vcam1P29533 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.46□□□□□ -0.09
Vcam1P29533 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Vcam1P29533 Gm22902-201ENSMUST00000158488 302 ntBASIC14.46□□□□□ -0.09
Vcam1P29533 Gm20426-201ENSMUST00000173657 440 ntBASIC14.46□□□□□ -0.09
Vcam1P29533 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
Vcam1P29533 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.46□□□□□ -0.09
Vcam1P29533 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Vcam1P29533 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcam1P29533 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcam1P29533 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcam1P29533 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcam1P29533 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.46□□□□□ -0.09
Vcam1P29533 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Vcam1P29533 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vcam1P29533 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Vcam1P29533 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vcam1P29533 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.46□□□□□ -0.1
Vcam1P29533 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vcam1P29533 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.45□□□□□ -0.1
Vcam1P29533 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.45□□□□□ -0.1
Vcam1P29533 Gm11331-201ENSMUST00000119764 288 ntBASIC14.45□□□□□ -0.1
Vcam1P29533 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.45□□□□□ -0.1
Vcam1P29533 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.45□□□□□ -0.1
Vcam1P29533 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Gm18734-201ENSMUST00000172937 808 ntBASIC14.45□□□□□ -0.1
Vcam1P29533 Gm7848-201ENSMUST00000210739 718 ntBASIC14.45□□□□□ -0.1
Vcam1P29533 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.45□□□□□ -0.1
Vcam1P29533 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.45□□□□□ -0.1
Vcam1P29533 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.45□□□□□ -0.1
Vcam1P29533 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.45□□□□□ -0.1
Vcam1P29533 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vcam1P29533 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.45□□□□□ -0.1
Vcam1P29533 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vcam1P29533 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vcam1P29533 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Vcam1P29533 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcam1P29533 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.44□□□□□ -0.1
Vcam1P29533 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vcam1P29533 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vcam1P29533 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.44□□□□□ -0.1
Vcam1P29533 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.44□□□□□ -0.1
Vcam1P29533 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.44□□□□□ -0.1
Vcam1P29533 Gm43947-201ENSMUST00000203019 959 ntBASIC14.44□□□□□ -0.1
Vcam1P29533 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.44□□□□□ -0.1
Vcam1P29533 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.44□□□□□ -0.1
Vcam1P29533 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcam1P29533 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.44□□□□□ -0.1
Vcam1P29533 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms