Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl6P27784 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl6P27784 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Ccl6P27784 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Ccl6P27784 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl6P27784 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Ccl6P27784 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl6P27784 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.85□□□□□ -0.83
Ccl6P27784 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl6P27784 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl6P27784 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl6P27784 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.85□□□□□ -0.83
Ccl6P27784 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl6P27784 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl6P27784 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl6P27784 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Ccl6P27784 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Ccl6P27784 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Ccl6P27784 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Ccl6P27784 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.84□□□□□ -0.83
Ccl6P27784 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.84□□□□□ -0.83
Ccl6P27784 Gm2231-201ENSMUST00000125661 612 ntBASIC9.84□□□□□ -0.83
Ccl6P27784 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.84□□□□□ -0.83
Ccl6P27784 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.84□□□□□ -0.83
Ccl6P27784 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.84□□□□□ -0.83
Ccl6P27784 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.84□□□□□ -0.83
Ccl6P27784 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.84□□□□□ -0.83
Ccl6P27784 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.84□□□□□ -0.83
Ccl6P27784 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Ccl6P27784 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Ccl6P27784 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Ccl6P27784 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.84□□□□□ -0.83
Ccl6P27784 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Ccl6P27784 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl6P27784 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Ccl6P27784 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.83□□□□□ -0.84
Ccl6P27784 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Ccl6P27784 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Ccl6P27784 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.83□□□□□ -0.84
Ccl6P27784 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.83□□□□□ -0.84
Ccl6P27784 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Ccl6P27784 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Ccl6P27784 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Ccl6P27784 Gm12390-201ENSMUST00000117897 397 ntBASIC9.83□□□□□ -0.84
Ccl6P27784 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.83□□□□□ -0.84
Ccl6P27784 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.83□□□□□ -0.84
Ccl6P27784 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Ccl6P27784 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Gm4271-201ENSMUST00000174444 973 ntBASIC9.83□□□□□ -0.84
Ccl6P27784 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.83□□□□□ -0.84
Ccl6P27784 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC9.83□□□□□ -0.84
Ccl6P27784 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.83□□□□□ -0.84
Ccl6P27784 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.83□□□□□ -0.84
Ccl6P27784 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.83□□□□□ -0.84
Ccl6P27784 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.83□□□□□ -0.84
Ccl6P27784 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.83□□□□□ -0.84
Ccl6P27784 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl6P27784 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms