Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ccl1P10146 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Ccl1P10146 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Ccl1P10146 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.77□□□□□ -0.85
Ccl1P10146 Gm6415-201ENSMUST00000118488 348 ntBASIC9.77□□□□□ -0.85
Ccl1P10146 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.77□□□□□ -0.85
Ccl1P10146 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.77□□□□□ -0.85
Ccl1P10146 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Ccl1P10146 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
Ccl1P10146 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC9.77□□□□□ -0.85
Ccl1P10146 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Gm17795-201ENSMUST00000214505 757 ntBASIC9.77□□□□□ -0.85
Ccl1P10146 Gm5779-201ENSMUST00000218467 910 ntBASIC9.77□□□□□ -0.85
Ccl1P10146 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Ccl1P10146 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.77□□□□□ -0.85
Ccl1P10146 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Ccl1P10146 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.76□□□□□ -0.85
Ccl1P10146 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Ccl1P10146 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Ccl1P10146 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Ccl1P10146 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.76□□□□□ -0.85
Ccl1P10146 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Ccl1P10146 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.76□□□□□ -0.85
Ccl1P10146 Gm14494-201ENSMUST00000118786 435 ntBASIC9.76□□□□□ -0.85
Ccl1P10146 Gm6447-201ENSMUST00000118905 835 ntBASIC9.76□□□□□ -0.85
Ccl1P10146 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.76□□□□□ -0.85
Ccl1P10146 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC9.76□□□□□ -0.85
Ccl1P10146 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Mzt1-203ENSMUST00000227948 952 ntBASIC9.76□□□□□ -0.85
Ccl1P10146 Gm15500-202ENSMUST00000071641 1019 ntBASIC9.76□□□□□ -0.85
Ccl1P10146 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Ccl1P10146 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Gm10175-201ENSMUST00000086013 645 ntBASIC9.76□□□□□ -0.85
Ccl1P10146 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.76□□□□□ -0.85
Ccl1P10146 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.76□□□□□ -0.85
Ccl1P10146 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Ccl1P10146 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Ccl1P10146 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.76□□□□□ -0.85
Ccl1P10146 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl1P10146 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Ccl1P10146 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.76□□□□□ -0.85
Ccl1P10146 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.76□□□□□ -0.85
Ccl1P10146 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl1P10146 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl1P10146 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl1P10146 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms