Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Gm42463-201ENSMUST00000198041 4886 ntBASIC8.64□□□□□ -1.03
Smim1P0C8K7 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 AC153872.1-201ENSMUST00000199539 128 ntBASIC8.64□□□□□ -1.03
Smim1P0C8K7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Gm5320-201ENSMUST00000207163 1519 ntBASIC8.64□□□□□ -1.03
Smim1P0C8K7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC8.64□□□□□ -1.03
Smim1P0C8K7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Gm43760-201ENSMUST00000202120 3015 ntBASIC8.64□□□□□ -1.03
Smim1P0C8K7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC8.64□□□□□ -1.03
Smim1P0C8K7 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Gm18227-201ENSMUST00000211082 1468 ntBASIC8.64□□□□□ -1.03
Smim1P0C8K7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smim1P0C8K7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC8.63□□□□□ -1.03
Smim1P0C8K7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Gm10829-201ENSMUST00000202084 2988 ntBASIC8.63□□□□□ -1.03
Smim1P0C8K7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Gm6226-201ENSMUST00000117765 1146 ntBASIC8.63□□□□□ -1.03
Smim1P0C8K7 Gm15460-201ENSMUST00000118147 391 ntBASIC8.63□□□□□ -1.03
Smim1P0C8K7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Gm7284-201ENSMUST00000131667 944 ntBASIC8.63□□□□□ -1.03
Smim1P0C8K7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Gm4804-201ENSMUST00000182234 999 ntBASIC8.63□□□□□ -1.03
Smim1P0C8K7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC8.63□□□□□ -1.03
Smim1P0C8K7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Gm38187-201ENSMUST00000195609 4709 ntBASIC8.63□□□□□ -1.03
Smim1P0C8K7 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smim1P0C8K7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms