Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp6P0C0A3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp6P0C0A3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp6P0C0A3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Gm27572-201ENSMUST00000183702 255 ntBASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Gm37424-201ENSMUST00000191727 561 ntBASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp6P0C0A3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Gm17420-201ENSMUST00000164753 153 ntBASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Gm25927-201ENSMUST00000175058 117 ntBASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Gm37008-201ENSMUST00000195712 319 ntBASIC13.76□□□□□ -0.21
Chmp6P0C0A3 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp6P0C0A3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms