Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hoxd3P09027 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Hoxd3P09027 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Hoxd3P09027 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.98□□□□□ -0.81
Hoxd3P09027 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm12601-201ENSMUST00000118994 846 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm14704-201ENSMUST00000120300 874 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm22588-201ENSMUST00000157510 140 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm3890-201ENSMUST00000182416 207 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm29396-201ENSMUST00000185659 716 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm21139-201ENSMUST00000186594 877 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm37576-201ENSMUST00000194228 372 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm43787-201ENSMUST00000197792 1037 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.98□□□□□ -0.81
Hoxd3P09027 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC9.98□□□□□ -0.81
Hoxd3P09027 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC9.98□□□□□ -0.81
Hoxd3P09027 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm17383-201ENSMUST00000078739 1041 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Hoxd3P09027 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Hoxd3P09027 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm28386-201ENSMUST00000189147 1849 ntBASIC9.98□□□□□ -0.81
Hoxd3P09027 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hoxd3P09027 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Hoxd3P09027 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Hoxd3P09027 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.97□□□□□ -0.81
Hoxd3P09027 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC9.97□□□□□ -0.81
Hoxd3P09027 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.97□□□□□ -0.81
Hoxd3P09027 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.97□□□□□ -0.81
Hoxd3P09027 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Hoxd3P09027 Gm27516-201ENSMUST00000184237 98 ntBASIC9.97□□□□□ -0.81
Hoxd3P09027 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hoxd3P09027 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC9.97□□□□□ -0.81
Hoxd3P09027 Gm28438-201ENSMUST00000188299 345 ntBASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms