Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm11509-201ENSMUST00000117358 325 ntBASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm14724-201ENSMUST00000118400 537 ntBASIC13.36□□□□□ -0.27
Hoxc8P09025 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Hoxc8P09025 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm43184-201ENSMUST00000197247 542 ntBASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm18711-201ENSMUST00000199341 750 ntBASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm4607-201ENSMUST00000206649 577 ntBASIC13.36□□□□□ -0.27
Hoxc8P09025 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.36□□□□□ -0.27
Hoxc8P09025 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.36□□□□□ -0.27
Hoxc8P09025 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.36□□□□□ -0.27
Hoxc8P09025 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.36□□□□□ -0.27
Hoxc8P09025 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.36□□□□□ -0.27
Hoxc8P09025 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Hoxc8P09025 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.35□□□□□ -0.27
Hoxc8P09025 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.35□□□□□ -0.27
Hoxc8P09025 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hoxc8P09025 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
Hoxc8P09025 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.35□□□□□ -0.27
Hoxc8P09025 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hoxc8P09025 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Hoxc8P09025 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hoxc8P09025 Mir7032-201ENSMUST00000185154 79 ntBASIC13.35□□□□□ -0.27
Hoxc8P09025 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.35□□□□□ -0.27
Hoxc8P09025 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.35□□□□□ -0.27
Hoxc8P09025 Gm18041-201ENSMUST00000218210 618 ntBASIC13.35□□□□□ -0.27
Hoxc8P09025 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.35□□□□□ -0.27
Hoxc8P09025 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.35□□□□□ -0.27
Hoxc8P09025 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hoxc8P09025 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc8P09025 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hoxc8P09025 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm11511-201ENSMUST00000118146 540 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm7722-201ENSMUST00000120646 741 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm12164-201ENSMUST00000121695 551 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm23085-201ENSMUST00000157849 293 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm4157-201ENSMUST00000211647 679 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.34□□□□□ -0.27
Hoxc8P09025 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.34□□□□□ -0.27
Hoxc8P09025 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc8P09025 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms