Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.44□□□□□ -0.42
Hoxa4P06798 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Gm2991-201ENSMUST00000173338 480 ntBASIC12.44□□□□□ -0.42
Hoxa4P06798 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.44□□□□□ -0.42
Hoxa4P06798 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.44□□□□□ -0.42
Hoxa4P06798 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hoxa4P06798 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.43□□□□□ -0.42
Hoxa4P06798 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm22323-201ENSMUST00000103832 109 ntBASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm25214-201ENSMUST00000104573 129 ntBASIC12.43□□□□□ -0.42
Hoxa4P06798 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm14723-201ENSMUST00000118686 215 ntBASIC12.43□□□□□ -0.42
Hoxa4P06798 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm38341-201ENSMUST00000195357 515 ntBASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm44364-201ENSMUST00000198368 141 ntBASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm43758-201ENSMUST00000199500 367 ntBASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm30285-201ENSMUST00000214614 422 ntBASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm39404-201ENSMUST00000216350 313 ntBASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa4P06798 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Hoxa4P06798 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms