Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.27□□□□□ -0.61
P06344 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.27□□□□□ -0.61
P06344 Gm13813-201ENSMUST00000120998 787 ntBASIC11.27□□□□□ -0.61
P06344 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.27□□□□□ -0.61
P06344 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.27□□□□□ -0.61
P06344 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.27□□□□□ -0.61
P06344 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.27□□□□□ -0.61
P06344 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.27□□□□□ -0.61
P06344 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
P06344 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Gm6621-201ENSMUST00000193251 772 ntBASIC11.27□□□□□ -0.61
P06344 Gm44364-201ENSMUST00000198368 141 ntBASIC11.27□□□□□ -0.61
P06344 Morn2-202ENSMUST00000227729 656 ntBASIC11.27□□□□□ -0.61
P06344 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.27□□□□□ -0.61
P06344 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
P06344 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
P06344 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
P06344 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
P06344 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06344 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
P06344 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
P06344 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
P06344 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
P06344 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.26□□□□□ -0.61
P06344 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.26□□□□□ -0.61
P06344 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
P06344 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
P06344 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.26□□□□□ -0.61
P06344 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.26□□□□□ -0.61
P06344 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.26□□□□□ -0.61
P06344 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.26□□□□□ -0.61
P06344 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
P06344 Gm43758-201ENSMUST00000199500 367 ntBASIC11.26□□□□□ -0.61
P06344 Gm45865-201ENSMUST00000211815 945 ntBASIC11.26□□□□□ -0.61
P06344 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
P06344 Gm22058-201ENSMUST00000083393 310 ntBASIC11.26□□□□□ -0.61
P06344 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Daam2-202ENSMUST00000224595 1926 ntBASIC11.26□□□□□ -0.61
P06344 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.26□□□□□ -0.61
P06344 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.26□□□□□ -0.61
P06344 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.26□□□□□ -0.61
P06344 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.26□□□□□ -0.61
P06344 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.26□□□□□ -0.61
P06344 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms