Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.79□□□□□ -0.36
PdgfrbP05622 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.79□□□□□ -0.36
PdgfrbP05622 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.79□□□□□ -0.36
PdgfrbP05622 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PdgfrbP05622 Gm11591-201ENSMUST00000120063 702 ntBASIC12.79□□□□□ -0.36
PdgfrbP05622 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
PdgfrbP05622 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.79□□□□□ -0.36
PdgfrbP05622 Gm25927-201ENSMUST00000175058 117 ntBASIC12.79□□□□□ -0.36
PdgfrbP05622 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Gm43433-201ENSMUST00000196573 481 ntBASIC12.79□□□□□ -0.36
PdgfrbP05622 AC114573.1-201ENSMUST00000224120 1210 ntBASIC12.79□□□□□ -0.36
PdgfrbP05622 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.79□□□□□ -0.36
PdgfrbP05622 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
PdgfrbP05622 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PdgfrbP05622 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.79□□□□□ -0.36
PdgfrbP05622 Gm9519-201ENSMUST00000206108 1337 ntBASIC12.79□□□□□ -0.36
PdgfrbP05622 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfrbP05622 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Gm12502-201ENSMUST00000120197 444 ntBASIC12.78□□□□□ -0.36
PdgfrbP05622 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.78□□□□□ -0.36
PdgfrbP05622 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Mir1982-201ENSMUST00000157368 74 ntBASIC12.78□□□□□ -0.36
PdgfrbP05622 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.78□□□□□ -0.36
PdgfrbP05622 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Gm6546-201ENSMUST00000192096 766 ntBASIC12.78□□□□□ -0.36
PdgfrbP05622 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.78□□□□□ -0.36
PdgfrbP05622 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.78□□□□□ -0.36
PdgfrbP05622 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.78□□□□□ -0.36
PdgfrbP05622 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.78□□□□□ -0.36
PdgfrbP05622 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.78□□□□□ -0.36
PdgfrbP05622 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.78□□□□□ -0.36
PdgfrbP05622 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PdgfrbP05622 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
PdgfrbP05622 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdgfrbP05622 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdgfrbP05622 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PdgfrbP05622 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PdgfrbP05622 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdgfrbP05622 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdgfrbP05622 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdgfrbP05622 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
PdgfrbP05622 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdgfrbP05622 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdgfrbP05622 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdgfrbP05622 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdgfrbP05622 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PdgfrbP05622 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms