Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.09□□□□□ -0.47
P04213 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P04213 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.09□□□□□ -0.47
P04213 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.09□□□□□ -0.47
P04213 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P04213 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Gm24231-201ENSMUST00000104315 133 ntBASIC12.09□□□□□ -0.47
P04213 Gm12390-201ENSMUST00000117897 397 ntBASIC12.09□□□□□ -0.47
P04213 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.09□□□□□ -0.47
P04213 Gm1335-201ENSMUST00000121653 386 ntBASIC12.09□□□□□ -0.47
P04213 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.09□□□□□ -0.47
P04213 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.09□□□□□ -0.47
P04213 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
P04213 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.09□□□□□ -0.47
P04213 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04213 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
P04213 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
P04213 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.08□□□□□ -0.47
P04213 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.08□□□□□ -0.48
P04213 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
P04213 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
P04213 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
P04213 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.08□□□□□ -0.48
P04213 Gm11964-201ENSMUST00000120982 444 ntBASIC12.08□□□□□ -0.48
P04213 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.08□□□□□ -0.48
P04213 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
P04213 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
P04213 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
P04213 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
P04213 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
P04213 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
P04213 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
P04213 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.08□□□□□ -0.48
P04213 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04213 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04213 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
P04213 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04213 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04213 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04213 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04213 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04213 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.07□□□□□ -0.48
P04213 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms