Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.23□□□□□ -0.93
TcraP01849 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.23□□□□□ -0.93
TcraP01849 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.23□□□□□ -0.93
TcraP01849 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
TcraP01849 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
TcraP01849 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.23□□□□□ -0.93
TcraP01849 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.23□□□□□ -0.93
TcraP01849 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
TcraP01849 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.23□□□□□ -0.93
TcraP01849 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
TcraP01849 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
TcraP01849 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
TcraP01849 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
TcraP01849 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.22□□□□□ -0.93
TcraP01849 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
TcraP01849 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
TcraP01849 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
TcraP01849 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
TcraP01849 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.22□□□□□ -0.93
TcraP01849 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC9.22□□□□□ -0.93
TcraP01849 Gm15693-201ENSMUST00000120470 637 ntBASIC9.22□□□□□ -0.93
TcraP01849 Gm14767-201ENSMUST00000121559 586 ntBASIC9.22□□□□□ -0.93
TcraP01849 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.22□□□□□ -0.93
TcraP01849 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.22□□□□□ -0.93
TcraP01849 Gm22175-201ENSMUST00000175007 78 ntBASIC9.22□□□□□ -0.93
TcraP01849 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC9.22□□□□□ -0.93
TcraP01849 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
TcraP01849 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
TcraP01849 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.22□□□□□ -0.93
TcraP01849 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC9.22□□□□□ -0.93
TcraP01849 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
TcraP01849 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
TcraP01849 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TcraP01849 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TcraP01849 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TcraP01849 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
TcraP01849 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
TcraP01849 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TcraP01849 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
TcraP01849 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TcraP01849 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
TcraP01849 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
TcraP01849 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TcraP01849 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms