Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm28646-201ENSMUST00000188220 697 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Gm28205-201ENSMUST00000189177 697 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Gm29032-201ENSMUST00000189797 697 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Gm28695-201ENSMUST00000190300 697 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Gm37448-201ENSMUST00000192795 697 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 AU022133-201ENSMUST00000200601 873 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Ttc3O88196 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ttc3O88196 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.15□□□□□ -0.3
Ttc3O88196 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ttc3O88196 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ttc3O88196 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.14□□□□□ -0.31
Ttc3O88196 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.14□□□□□ -0.31
Ttc3O88196 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.14□□□□□ -0.31
Ttc3O88196 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Gm8959-201ENSMUST00000213150 571 ntBASIC13.14□□□□□ -0.31
Ttc3O88196 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ttc3O88196 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ttc3O88196 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ttc3O88196 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.14□□□□□ -0.31
Ttc3O88196 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.14□□□□□ -0.31
Ttc3O88196 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.14□□□□□ -0.31
Ttc3O88196 Gm9230-201ENSMUST00000188228 532 ntBASIC13.14□□□□□ -0.31
Ttc3O88196 Gm43962-201ENSMUST00000203898 190 ntBASIC13.14□□□□□ -0.31
Ttc3O88196 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Ttc3O88196 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Gm26035-201ENSMUST00000083065 308 ntBASIC13.14□□□□□ -0.31
Ttc3O88196 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.14□□□□□ -0.31
Ttc3O88196 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ttc3O88196 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.13□□□□□ -0.31
Ttc3O88196 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.13□□□□□ -0.31
Ttc3O88196 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Gm14644-201ENSMUST00000116671 647 ntBASIC13.13□□□□□ -0.31
Ttc3O88196 Gm11331-201ENSMUST00000119764 288 ntBASIC13.13□□□□□ -0.31
Ttc3O88196 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.13□□□□□ -0.31
Ttc3O88196 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.13□□□□□ -0.31
Ttc3O88196 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ttc3O88196 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Ttc3O88196 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.13□□□□□ -0.31
Ttc3O88196 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ttc3O88196 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ttc3O88196 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.13□□□□□ -0.31
Ttc3O88196 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.13□□□□□ -0.31
Ttc3O88196 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ttc3O88196 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.13□□□□□ -0.31
Ttc3O88196 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.13□□□□□ -0.31
Ttc3O88196 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Ttc3O88196 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ttc3O88196 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ttc3O88196 Gm24934-201ENSMUST00000103764 111 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms