Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Ldb2O55203 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ldb2O55203 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Gm5187-201ENSMUST00000117317 991 ntBASIC12.55□□□□□ -0.4
Ldb2O55203 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.55□□□□□ -0.4
Ldb2O55203 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.55□□□□□ -0.4
Ldb2O55203 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.55□□□□□ -0.4
Ldb2O55203 Gm8018-201ENSMUST00000173536 789 ntBASIC12.55□□□□□ -0.4
Ldb2O55203 Gm5370-201ENSMUST00000187187 574 ntBASIC12.55□□□□□ -0.4
Ldb2O55203 Gm37008-201ENSMUST00000195712 319 ntBASIC12.55□□□□□ -0.4
Ldb2O55203 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.55□□□□□ -0.4
Ldb2O55203 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.55□□□□□ -0.4
Ldb2O55203 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.55□□□□□ -0.4
Ldb2O55203 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.55□□□□□ -0.4
Ldb2O55203 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
Ldb2O55203 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ldb2O55203 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ldb2O55203 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ldb2O55203 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.55□□□□□ -0.4
Ldb2O55203 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.55□□□□□ -0.4
Ldb2O55203 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.55□□□□□ -0.4
Ldb2O55203 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.55□□□□□ -0.4
Ldb2O55203 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ldb2O55203 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ldb2O55203 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.54□□□□□ -0.4
Ldb2O55203 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.54□□□□□ -0.4
Ldb2O55203 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Gm9630-201ENSMUST00000178304 885 ntBASIC12.54□□□□□ -0.4
Ldb2O55203 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.54□□□□□ -0.4
Ldb2O55203 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.54□□□□□ -0.4
Ldb2O55203 Gm37424-201ENSMUST00000191727 561 ntBASIC12.54□□□□□ -0.4
Ldb2O55203 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.54□□□□□ -0.4
Ldb2O55203 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.54□□□□□ -0.4
Ldb2O55203 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.54□□□□□ -0.4
Ldb2O55203 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.54□□□□□ -0.4
Ldb2O55203 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ldb2O55203 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.54□□□□□ -0.4
Ldb2O55203 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ldb2O55203 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.54□□□□□ -0.4
Ldb2O55203 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ldb2O55203 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb2O55203 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.54□□□□□ -0.4
Ldb2O55203 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.53□□□□□ -0.4
Ldb2O55203 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ldb2O55203 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms