Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.74□□□□□ -0.53
BckdkO55028 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.74□□□□□ -0.53
BckdkO55028 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Gm7029-201ENSMUST00000173226 450 ntBASIC11.74□□□□□ -0.53
BckdkO55028 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.74□□□□□ -0.53
BckdkO55028 Gm3961-201ENSMUST00000204425 994 ntBASIC11.74□□□□□ -0.53
BckdkO55028 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.74□□□□□ -0.53
BckdkO55028 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.74□□□□□ -0.53
BckdkO55028 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
BckdkO55028 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.74□□□□□ -0.53
BckdkO55028 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
BckdkO55028 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
BckdkO55028 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.74□□□□□ -0.53
BckdkO55028 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.74□□□□□ -0.53
BckdkO55028 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BckdkO55028 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
BckdkO55028 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
BckdkO55028 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Gm8805-201ENSMUST00000117848 313 ntBASIC11.73□□□□□ -0.53
BckdkO55028 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
BckdkO55028 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.73□□□□□ -0.53
BckdkO55028 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.73□□□□□ -0.53
BckdkO55028 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
BckdkO55028 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.73□□□□□ -0.53
BckdkO55028 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.73□□□□□ -0.53
BckdkO55028 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
BckdkO55028 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
BckdkO55028 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
BckdkO55028 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.73□□□□□ -0.53
BckdkO55028 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
BckdkO55028 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.73□□□□□ -0.53
BckdkO55028 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.73□□□□□ -0.53
BckdkO55028 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
BckdkO55028 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.73□□□□□ -0.53
BckdkO55028 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BckdkO55028 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.72□□□□□ -0.53
BckdkO55028 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.72□□□□□ -0.53
BckdkO55028 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.72□□□□□ -0.53
BckdkO55028 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Gm22018-201ENSMUST00000104357 131 ntBASIC11.72□□□□□ -0.53
BckdkO55028 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms