Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Stx1aO35526 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Stx1aO35526 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.17□□□□□ -0.14
Stx1aO35526 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Stx1aO35526 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Stx1aO35526 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Stx1aO35526 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.16□□□□□ -0.14
Stx1aO35526 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Stx1aO35526 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Stx1aO35526 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.16□□□□□ -0.14
Stx1aO35526 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Stx1aO35526 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Stx1aO35526 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.16□□□□□ -0.14
Stx1aO35526 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Stx1aO35526 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Stx1aO35526 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.16□□□□□ -0.14
Stx1aO35526 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Stx1aO35526 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
Stx1aO35526 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.16□□□□□ -0.14
Stx1aO35526 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.16□□□□□ -0.14
Stx1aO35526 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Stx1aO35526 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Stx1aO35526 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.16□□□□□ -0.14
Stx1aO35526 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stx1aO35526 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.15□□□□□ -0.14
Stx1aO35526 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Stx1aO35526 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.15□□□□□ -0.14
Stx1aO35526 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.15□□□□□ -0.14
Stx1aO35526 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Gm23363-201ENSMUST00000175024 79 ntBASIC14.15□□□□□ -0.14
Stx1aO35526 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.15□□□□□ -0.14
Stx1aO35526 Gm20949-201ENSMUST00000206478 952 ntBASIC14.15□□□□□ -0.14
Stx1aO35526 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.15□□□□□ -0.14
Stx1aO35526 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.15□□□□□ -0.14
Stx1aO35526 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Stx1aO35526 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.15□□□□□ -0.14
Stx1aO35526 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Stx1aO35526 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Stx1aO35526 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Stx1aO35526 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stx1aO35526 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Stx1aO35526 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms