Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hps1O08983 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.79□□□□□ -0.52
Hps1O08983 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hps1O08983 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Hps1O08983 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hps1O08983 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hps1O08983 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Hps1O08983 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.79□□□□□ -0.52
Hps1O08983 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.79□□□□□ -0.52
Hps1O08983 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.79□□□□□ -0.52
Hps1O08983 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hps1O08983 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.79□□□□□ -0.52
Hps1O08983 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Hps1O08983 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hps1O08983 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.79□□□□□ -0.52
Hps1O08983 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hps1O08983 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hps1O08983 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.78□□□□□ -0.52
Hps1O08983 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hps1O08983 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.78□□□□□ -0.52
Hps1O08983 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.78□□□□□ -0.52
Hps1O08983 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.78□□□□□ -0.52
Hps1O08983 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.78□□□□□ -0.52
Hps1O08983 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.78□□□□□ -0.52
Hps1O08983 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.78□□□□□ -0.52
Hps1O08983 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.78□□□□□ -0.52
Hps1O08983 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Hps1O08983 Gm9257-201ENSMUST00000221254 232 ntBASIC11.78□□□□□ -0.52
Hps1O08983 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hps1O08983 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hps1O08983 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hps1O08983 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Hps1O08983 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.78□□□□□ -0.52
Hps1O08983 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.78□□□□□ -0.52
Hps1O08983 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hps1O08983 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.77□□□□□ -0.52
Hps1O08983 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
Hps1O08983 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hps1O08983 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hps1O08983 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hps1O08983 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hps1O08983 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hps1O08983 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.77□□□□□ -0.53
Hps1O08983 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms