Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Raet1cO08604 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Raet1cO08604 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Raet1cO08604 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Raet1cO08604 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.28□□□□□ -0.6
Raet1cO08604 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Raet1cO08604 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.28□□□□□ -0.6
Raet1cO08604 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Raet1cO08604 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.28□□□□□ -0.6
Raet1cO08604 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Raet1cO08604 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Raet1cO08604 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.28□□□□□ -0.6
Raet1cO08604 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Raet1cO08604 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Raet1cO08604 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Raet1cO08604 Gm5745-201ENSMUST00000183748 313 ntBASIC11.28□□□□□ -0.6
Raet1cO08604 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.28□□□□□ -0.6
Raet1cO08604 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.28□□□□□ -0.6
Raet1cO08604 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.28□□□□□ -0.6
Raet1cO08604 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.28□□□□□ -0.6
Raet1cO08604 Gm40466-201ENSMUST00000212174 422 ntBASIC11.28□□□□□ -0.6
Raet1cO08604 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Raet1cO08604 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Raet1cO08604 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.28□□□□□ -0.6
Raet1cO08604 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1cO08604 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.27□□□□□ -0.6
Raet1cO08604 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1cO08604 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Raet1cO08604 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.27□□□□□ -0.61
Raet1cO08604 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.27□□□□□ -0.61
Raet1cO08604 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Raet1cO08604 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.27□□□□□ -0.61
Raet1cO08604 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.27□□□□□ -0.61
Raet1cO08604 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.27□□□□□ -0.61
Raet1cO08604 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.27□□□□□ -0.61
Raet1cO08604 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.27□□□□□ -0.61
Raet1cO08604 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.27□□□□□ -0.61
Raet1cO08604 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1cO08604 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.27□□□□□ -0.61
Raet1cO08604 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.27□□□□□ -0.61
Raet1cO08604 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Raet1cO08604 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms