Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shisa8J3QNX5 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Gm16202-201ENSMUST00000117532 544 ntBASIC11.5□□□□□ -0.57
Shisa8J3QNX5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shisa8J3QNX5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms