Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Gm13809-201ENSMUST00000117921 597 ntBASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Gm2965-201ENSMUST00000198365 343 ntBASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Gm10288-201ENSMUST00000084614 537 ntBASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Gm8100-201ENSMUST00000182906 988 ntBASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcf11G3X9Z4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Gm12857-201ENSMUST00000117678 592 ntBASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Gm6397-201ENSMUST00000161973 1069 ntBASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Gm38117-201ENSMUST00000194653 939 ntBASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 AC135469.1-201ENSMUST00000225984 772 ntBASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Gm7551-201ENSMUST00000089593 1074 ntBASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcf11G3X9Z4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Gm15573-201ENSMUST00000119487 540 ntBASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Gm4310-201ENSMUST00000177847 889 ntBASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms